Discovery of 4-[(2S)-2-{[4-(4-chlorophenoxy)phenoxy]methyl}-1-pyrrolidinyl]butanoic acid (DG-051) as a novel leukotriene A4 hydrolase inhibitor of leukotriene B4 biosynthesis

J Med Chem. 2010 Jan 28;53(2):573-85. doi: 10.1021/jm900838g.

Abstract

Both in-house human genetic and literature data have converged on the identification of leukotriene 4 hydrolase (LTA(4)H) as a key target for the treatment of cardiovascular disease. We combined fragment-based crystallography screening with an iterative medicinal chemistry effort to optimize inhibitors of LTA(4)H. Ligand efficiency was followed throughout our structure-activity studies. As applied within the context of LTA(4)H inhibitor design, the chemistry team was able to design a potent compound 20 (DG-051) (K(d) = 26 nM) with high aqueous solubility (>30 mg/mL) and high oral bioavailability (>80% across species) that is currently undergoing clinical evaluation for the treatment of myocardial infarction and stroke. The structural biology-chemistry interaction described in this paper provides a sound alternative to conventional screening techniques. This is the first example of a gene-to-clinic paradigm enabled by a fragment-based drug discovery effort.

MeSH terms

  • Biological Availability
  • Butyrates / chemistry
  • Butyrates / pharmacology*
  • Butyrates / therapeutic use
  • Cardiovascular Diseases / drug therapy*
  • Crystallography, X-Ray
  • Drug Discovery / methods*
  • Enzyme Inhibitors / chemistry
  • Enzyme Inhibitors / therapeutic use
  • Epoxide Hydrolases / antagonists & inhibitors*
  • Epoxide Hydrolases / biosynthesis
  • Heterocyclic Compounds / chemistry
  • Heterocyclic Compounds / pharmacology*
  • Heterocyclic Compounds / therapeutic use
  • Humans
  • Ligands
  • Myocardial Infarction / drug therapy
  • Peptide Fragments / chemistry
  • Solubility
  • Stroke / drug therapy
  • Structure-Activity Relationship

Substances

  • Butyrates
  • Enzyme Inhibitors
  • Heterocyclic Compounds
  • Ligands
  • Peptide Fragments
  • Epoxide Hydrolases
  • leukotriene A4 hydrolase

Associated data

  • PDB/3FH5
  • PDB/3FH7
  • PDB/3FH8
  • PDB/3FHE
  • PDB/3FTZ
  • PDB/3FUL